PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_009875-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 191aa    MW: 20946.7 Da    PI: 6.5184
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_009875-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH130.0001956921555
                   HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                   +i ++   L++l+P +    +k   Ka +L + ++Y++sLq
  NNU_009875-RA 56 KISERVRYLQDLVPGC----NKITGKAVMLDQIINYVQSLQ 92
                   78888888*******9....899*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.0174191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.15E-45596No hitNo description
Gene3DG3DSA:4.10.280.106.2E-1155108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.18E-1055107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MGEQPSPNGK KRKRVPESHS QLDPRQSEIE PQRDASQETL VSLKEQNAGT NSHLEKISER  60
VRYLQDLVPG CNKITGKAVM LDQIINYVQS LQRQVEFLSV KLATVNPEIN IDIEQVLSKY  120
KFFICGGGSS GILGFTPAMS SSHPQHITPP EGAFLVPSAR EDELQSALQL GFVPNPAVNN  180
LGQNGSMKAE P
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010248338.12e-85PREDICTED: transcription factor bHLH74-like isoform X5
SwissprotQ6NKN95e-38BH074_ARATH; Transcription factor bHLH74
TrEMBLA0A061FEC84e-48A0A061FEC8_THECC; Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1
STRINGPOPTR_0002s11540.11e-46(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.13e-39bHLH family protein